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List Archives >  EndNote List Archive >  Archive by date >  This Month By Date >  This Month By Topic

import filter for Wok/ISI v3

Search email archive for  

import filter for Wok/ISI v3
Author: =?iso-8859-1?Q?Marie-H=E9l=E8ne?= Bridet    Posted: Tue, 14 Sep 2004 16:21:46 +0200
We use Wok/ISI new version (version 3) since July. Unfortenatly we found
some problems while importing alerts email in EndNote. We didn't get any
new filter from ISI and since july, we fixed a new filter.

We still have two problems:
- when the title (or the Journal) begins with two (or more) capitals, the
title is not imported in Endnote
- with references from Wos, when Authors Keywords is not filled, then
Keywords Plus is not imported in EndNote.

Could someone help us with this?
Enclosed the filter we use and a txt file with two references showing the
problems.
Thank you in advance


________________________________________________________________________
This email has been scanned for all viruses by the MessageLabs Email
Security System.


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0904.enf"
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Content-Disposition: attachment; filename="WoK Alert WoKv3(ISI) 0904.enf"

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--=====================_28427533==_
Content-Type: text/plain; charset="us-ascii"
Content-Disposition: attachment; filename="pbtitre.txt"


*Record 1 of 300. Search terms matched: DNA(2)
*View Full Record:
http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Aler
ting
&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=000223001500007
*Order Full Text [ ]

Title:
Cellular features of an apoptotic form of programmed cell death during the
development of the ascidian, Boltenia villosa

Authors:
Bates, WR

Source:
ZOOLOGICAL SCIENCE, 21 (5): 553-563 MAY 2004

Language:
English

Document Type:
Article

Keywords Plus:
NF-KAPPA-B; CIONA-INTESTINALIS; ACTIVATION; MITOCHONDRIA; METAMORPHOSIS;
LOCALIZATION; PROTEINS; GENOME

Abstract:
The phylogenetic position of ascidians near the base of the chordate tree
makes
them ideal organisms for evolutionary developmental studies of programmed
cell
death (PCD). In the present study, the following key features of an
apoptotic
form of PCD are described in Boltenia villosa: fragmentation of *DNA*,
increases
in plasma membrane permeability, decreases in mitochondrial activity,
production
of reactive oxygen species (ROS), and caspase activation. First, evidence is

presented for apoptosis of cells within the ovary. Later in development,
during
the early phase of larval tail resorption at the beginning of metamorphosis,

some notochord nuclei showed *DNA* fragmentation and their cell corpses were

rapidly eliminated from the larval body. In striking contrast to the rapid
demise of notochord cells, larval muscle cells persisted for more than a
week
within developing juveniles. Rhodamine 123 and MTT experiments suggest that
mitochondria within some of the resorbed larval ta!
il muscle cells were metabolically active for more than a week.
Furthermore,
resorbed tail muscle cells contained a muscle-specific intermediate
filament,
termed p58, despite relatively high levels of ROS activity and the
ubiquitination of their plasma membranes at day two. Corpses of larval tail
muscle cells containing aggregated pigment granules survived within
juveniles
for more than a month, in contrast to the rapid elimination of notochord
cells.
Evidence consistent with the formation of larval muscle cell apoptotic
bodies is
presented. The most surprising result of the present study was that
caspase-8,
usually associated with apoptotic signaling, was activated in larval
endoderm
cells that develop into adult structures. When the present results were
compared
to features of PCD previously reported in other ascidians, significant
species
differences in PCD were revealed.

Reprint Address:
Bates, WR, Okanagan Univ Coll, Dept Biol, 3333 Univ Way, Kelowna, BC V1V
1V7,
Canada.

Research Institution addresses:
Okanagan Univ Coll, Dept Biol, Kelowna, BC V1V 1V7, Canada

E-mail Address:
/>
Cited References:
ABRAMS JM, 2002, CELL, V110, P403.
BAINES CP, 1997, J MOL CELL CARDIOL, V29, P207.
BATES WR, 1987, DEV BIOL, V119, P382.
BATES WR, 1996, DEV GROWTH DIFFER, V38, P307.
BRENNER C, 2000, SCIENCE, V289, P1150.
CHAMBON JP, 2002, DEVELOPMENT, V129, P3105.
CHAUDHARY PM, 2000, ONCOGENE, V19, P4451.
CLONEY RA, 1982, AM ZOOL, V22, P817.
DEHAL P, 2002, SCIENCE, V298, P2157.
DIKALOV S, 2002, J BIOL CHEM, V277, P25480.
DIXIT V, 2002, CELL, V111, P615.
GUMMIENNY TL, 1999, DEVELOPMENT, V126, P1011.
HOFFMAN KL, 2001, DEV BIOL, V229, P517.
HOLLAND LZ, 2003, BIOESSAYS, V25, P529.
HU WH, 2000, J BIOL CHEM, V275, P10838.
JACOBSON MD, 1997, CELL, V88, P347.
JEFFERY WR, 2002, MECH DEVELOP, V118, P111.
KOWALEVSKY A, 1868, NACHRICHTEN GESELLSC, V19, P401.
MATOVA N, 2001, DEV BIOL, V231, P291.
MCLAUGHLIN B, 2003, P NATL ACAD SCI USA, V100, P715.
NEWMEYER DD, 2003, CELL, V112, P481.
POLO S, 2002, NATURE, V416, P451.
SHIMADA M, 2001, DEV GROWTH DIFFER, V43, P145.
SPERANDIO S, 2000, P NATL ACAD SCI USA, V97, P14376.
SWALLA BJ, 1991, DEVELOPMENT, V111, P425.
TANNAHILL D, 1995, INT J DEV BIOL, V39, P549.

Cited Reference Count:
26

Times Cited:
0

Publisher:
ZOOLOGICAL SOC JAPAN; TOSHIN-BUILDING, HONGO 2-27-2, BUNKYO-KU, TOKYO, 113,
JAPAN

Subject Category:
ZOOLOGY

ISSN:
0289-0003

IDS Number:
842JY

========================================================================

============================================================================
====
*Record 9 of 300. Search terms matched: DNA(2)
*View Full Record:
http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Aler
ting
&SrcApp=Alerting&DestApp=CCC&DestLinkType=FullRecord&KeyUT=ISI:0002229127000
05
*Order Full Text [ ]

Title:
Necessity and usefulness of bioinformatic methods for microarray data
analysis

Authors:
Kestler, HA; Kufer, R

Source:
UROLOGE A, 43 (6): 669-674 JUN 2004

Language:
German

Document Type:
Article

Edition(s):
Clinical Medicine (CM)

Discipline(s):
UROLOGY & NEPHROLOGY

Keywords Plus:
COMPARATIVE GENOMIC HYBRIDIZATION; DNA MICROARRAYS; EXPRESSION PATTERNS;
PANCREATIC-CANCER; CLUSTER-ANALYSIS; IDENTIFICATION

Abstract:
Data emerging from DNA microarray experiments are usually difficult to
interpret. While the level of expression of several thousand genes can be
measured in a single experiment, only a few dozen experiments are normally
carried out, leading to data sets of very high dimensionality and low
cardinality. The computational analysis of gene expression data makes
significant usage of machine learning and statistical methods. Nevertheless,

caution should be used in the blind adoption of these methods, as this
usually
leads to an over-interpretation of the expression profiles. The following
presentation provides an overview of up-to-date principles of biostatistical

analysis. A potential application for the analysis of high-dimensional
expression profiles of prostate cancer is given.

Addresses:
Univ Ulm, Abt Neuroinformat, D-89069 Ulm, Germany; Univ Ulm, Innere Med Abt
1,
D-89069 Ulm, Germany; Univ Ulm, Urol Klin & Poliklin, D-89069 Ulm, Germany

Reprint Address:
KESTLER, HA, UNIV ULM, ABT NEUROINFORMAT, D-89069 ULM, GERMANY.
/>
Publisher:
SPRINGER, 233 SPRING STREET, NEW YORK, NY 10013 USA, NEW YORK.
http://www.springer-ny.com

ISSN:
0340-2592

IDS Number:
841ES
============================================================================
====

*Record 4 of 300. Search terms matched: DNA(1)
*View Full Record:
http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=Ale
rting&SrcApp=Alerting&DestApp=WOS&DestLinkType=FullRecord;KeyUT=00022300290
0014
*Order Full Text [ ]

Title:
UV disinfection in a model distribution system: biofilm growth and
microbial community

Authors:
Pozos, N; Scow, K; Wuertz, S; Darby, J

Source:
WATER RESEARCH, 38 (13): 3083-3091 JUL 2004

Language:
English

Document Type:
Article

Author Keywords:
potable water; Ultraviolet (UV) disinfection; biofilm; *DNA*
fingerprinting; intergenic transcribed spacer (ITS) analysis

Keywords Plus:
WATER DISTRIBUTION-SYSTEMS; DRINKING-WATER; MICROORGANISMS; DIVERSITY;
IMPACT

Abstract:
Two model distribution systems were operated in parallel to investigate the
impact of UV disinfection on water distribution system biofilms and
microbial community composition. One system received an influent irradiated
with UV light, whereas the control received the same influent with no
treatment. The biofilm in the UV system, as compared to the control, was
more responsive (i.e., had a greater increase in steady-state density of
heterotrophic bacteria) to the increased nutrient availability afforded by
a decrease in HRT from 12 to 2 h. However, the UV treatment did not have a
consistent impact on the biofilm community, indicating the processes
controlling HPC density were independent of the specific strains of
bacteria forming the biofilm. There was evidence that particle shielding
contributed to the survival of UV-susceptible bacteria. This hypothesis was
consistent with the presence of UV-susceptible bacteria in the UV system,
as well as the high similarity of the biofi!
lm communities in the UV and control systems in one of the experiments. To
simulate an intrusion event, opportunistic pathogens were added to each
system after the biofilm community reached steady-state. Opportunistic
pathogen attachment was not affected by the UV treatment, but was instead
correlated to the biofilm density of heterotrophic bacteria. (C) 2004
Elsevier Ltd. All rights reserved.

Reprint Address:
Pozos, N, Carollo Engn, 2700 Ygnacio Valley Rd 300, Walnut Creek, CA 94598
USA.

Research Institution addresses:
Carollo Engn, Walnut Creek, CA 94598 USA; Univ Calif Davis, Davis, CA 95616
USA

E-mail Address:
/>
Cited References:
*APHA AWWA WEF, 1998, STAND METH EX WAT WA.
*USEPA, 2003, 815D03007 USEPA OFF.
BORNEMAN J, 1997, APPL ENVIRON MICROB, V63, P2647.
BRAUNSTEIN JL, 1996, WATER ENVIRON RES, V68, P152.
BUTTERFIELD PW, 2002, WATER RES, V36, P4391.
CAMPER A, 1995, THESIS MONTANA STATE.
CAMPER A, 1996, 90708 AWWA RES FDN.
CAMPER A, 2001, P AWWA WAT QUAL TECH.
CAMPER AK, 1991, APPL ENVIRON MICROB, V57, P2233.
CHANDY JP, 2001, WATER RES, V35, P2677.
EMERICK RW, 2000, WATER ENVIRON RES, V72, P432.
GARCIAMARTINEZ J, 1999, J MICROBIOL METH, V36, P55.
GIESE N, 2002, THESIS U CALIFORNIA.
JOHNSON MJ, 2003, GEODERMA, V114, P279.
LAPARA TM, 2002, WATER RES, V36, P638.
LECHEVALLIER MW, 1990, J AM WATER WORKS ASS, V82, P74.
LUND V, 1995, WATER RES, V29, P1013.
MACKAY WG, 1999, J APPL MICROBIOL S, V85, S52.
MALLEY JP, 2000, INT UV ASSN NEWS, V2, P8.
MOMBA MNB, 1998, WATER SCI TECHNOL, V38, P283.
MURGEL GA, 1991, APPL ENVIRON MICROB, V57, P1987.
NORTON CD, 2000, APPL ENVIRON MICROB, V66, P268.
RICE AR, 2000, MICROBIAL ECOL, V41, P8.
ROGERS J, 1994, APPL ENVIRON MICROB, V60, P1842.
SCHWARTZ T, 1998, J MICROBIOL METH, V34, P113.
SCHWARTZ T, 1998, WATER RES, V32, P2787.
SZEWZYK U, 2000, ANNU REV MICROBIOL, V54, P81.
TOLKERNIELSEN T, 2000, J BACTERIOL, V182, P6482.

Cited Reference Count:
28

Times Cited:
0

Publisher:
PERGAMON-ELSEVIER SCIENCE LTD; THE BOULEVARD, LANGFORD LANE, KIDLINGTON,
OXFORD OX5 1GB, ENGLAND

Subject Category:
ENGINEERING, ENVIRONMENTAL; ENVIRONMENTAL SCIENCES; WATER RESOURCES

ISSN:
0043-1354

IDS Number:
842KL

========================================================================


--=====================_28427533==_
Content-Type: text/plain; charset="iso-8859-1"
Content-Transfer-Encoding: quoted-printable

=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
Marie-H=E9l=E8ne Bridet =20
INRA=20
Documentation/ERIST =20
Domaine de la Grande Ferrade =20
BP 81
33883 Villenave d'Ornon Cedex

http://www.bordeaux.inra.fr/urd

t=E9l : 05.57.12.26.65
fax : 05.57.12.26.59
email : />

--=====================_28427533==_--

________________________________________________________________________
This email has been scanned for all viruses by the MessageLabs Email
Security System.

Re: import filter for Wok/ISI v3
Author: John East    Posted: Fri, 17 Sep 2004 20:52:11 +1000
> We use Wok/ISI new version (version 3) since July. Unfortenatly we found
> some problems while importing alerts email in EndNote. We didn't get any
> new filter from ISI and since july, we fixed a new filter.
>
> We still have two problems:
> - when the title (or the Journal) begins with two (or more) capitals, the
> title is not imported in Endnote

I don't think that there is any solution to this problem. When EndNote finds
two capitals at the beginning of a line, it thinks that these are a field
tag. When it fails to locate this field tag in the filter template, it
assumes that this field is not required, and discards all the following
data.

> - with references from Wos, when Authors Keywords is not filled, then
> Keywords Plus is not imported in EndNote.

I suspect that your template has a line which reads:

Document Type: {IGNORE}

Just insert a new line:

Keywords Plus: Keywords

Alternatively, try the filter which you can download from our website at:
http://www.library.uq.edu.au/endnote/wos.html#alert


John East
University of Queensland Library
Email: />

________________________________________________________________________
This email has been scanned for all viruses by the MessageLabs Email
Security System.

________________________________________________________________________
This email has been scanned for all viruses by the MessageLabs Email
Security System.

Previous by date: printing different fields, Writing Fellow
Next by date: RE: sharing reference type, Michael Power
Previous thread: Report on reshuffled citations in EN7, Francisco Vaz Da Silva
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